Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm5419-201ENSMUST00000119301 527 ntBASIC11.44□□□□□ -0.58
Rnf38Q8BI21 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Mir1938-201ENSMUST00000158746 100 ntBASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm29396-201ENSMUST00000185659 716 ntBASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Olfr284-202ENSMUST00000206647 966 ntBASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm15610-201ENSMUST00000120584 195 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm27501-201ENSMUST00000183599 107 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm18935-201ENSMUST00000212692 664 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm10608-202ENSMUST00000213924 676 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gm7046-201ENSMUST00000221351 977 ntBASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf38Q8BI21 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm37489-201ENSMUST00000191883 159 ntBASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms