Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm25226-201ENSMUST00000158198 123 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm23694-201ENSMUST00000179335 110 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Mir7051-201ENSMUST00000184167 73 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm42790-201ENSMUST00000201268 969 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm2594-201ENSMUST00000214774 742 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm7525-201ENSMUST00000219425 454 ntBASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trnp1Q80ZI1 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm15528-201ENSMUST00000117821 864 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm15197-201ENSMUST00000120526 478 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm25998-201ENSMUST00000175397 53 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.24□□□□□ -0.29
Trnp1Q80ZI1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm23612-201ENSMUST00000103823 110 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm6158-201ENSMUST00000109467 904 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm15374-201ENSMUST00000119313 844 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm15196-201ENSMUST00000121406 482 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm23576-201ENSMUST00000179918 110 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms