Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm22920-201ENSMUST00000102175 109 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm12579-201ENSMUST00000118040 783 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm4310-201ENSMUST00000177847 889 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Mir7076-201ENSMUST00000183519 74 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm5714-201ENSMUST00000197343 566 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.32□□□□□ -0.6
Vrk1Q80X41 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vrk1Q80X41 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm11949-201ENSMUST00000117640 372 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm8731-201ENSMUST00000118088 412 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm22138-201ENSMUST00000158748 128 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm5706-201ENSMUST00000181525 993 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm43186-201ENSMUST00000198130 824 ntBASIC11.31□□□□□ -0.6
Vrk1Q80X41 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.31□□□□□ -0.6
Vrk1Q80X41 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vrk1Q80X41 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms