Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdh19Q80TF3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm4310-201ENSMUST00000177847 889 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm5714-201ENSMUST00000197343 566 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Mir7686-201ENSMUST00000200604 57 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm17872-201ENSMUST00000222550 532 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pcdh19Q80TF3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm42599-201ENSMUST00000201308 469 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm43916-201ENSMUST00000205062 967 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh19Q80TF3 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 211 ms