Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.89□□□□□ -0.51
Rad54bQ6PFE3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm26286-201ENSMUST00000104166 134 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm15370-201ENSMUST00000117158 253 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm8885-201ENSMUST00000189382 598 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm18187-201ENSMUST00000196476 984 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm45598-202ENSMUST00000210719 986 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Gm10608-202ENSMUST00000213924 676 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rad54bQ6PFE3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Gm23270-201ENSMUST00000104055 131 ntBASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Gm11930-201ENSMUST00000117788 190 ntBASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rad54bQ6PFE3 Gm5070-201ENSMUST00000177599 862 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 253.9 ms