Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf220Q6PDX6 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm11918-201ENSMUST00000121660 179 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm45384-201ENSMUST00000210451 277 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Spata33-207ENSMUST00000212760 4074 ntBASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf220Q6PDX6 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Snord83b-201ENSMUST00000104546 94 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm12203-201ENSMUST00000118235 598 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm12209-201ENSMUST00000120089 596 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm23984-201ENSMUST00000157139 203 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm26185-201ENSMUST00000157692 266 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm8810-201ENSMUST00000172895 754 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm37444-201ENSMUST00000193605 439 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf220Q6PDX6 Gm17794-201ENSMUST00000220252 955 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms