Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm28450-201ENSMUST00000187349 638 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm8956-201ENSMUST00000203939 825 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm44038-201ENSMUST00000203952 889 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm17931-201ENSMUST00000208132 634 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 AC154245.1-201ENSMUST00000224615 601 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.62□□□□□ -0.39
Scube3Q66PY1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scube3Q66PY1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm14263-201ENSMUST00000117955 746 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm23673-201ENSMUST00000157474 298 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm22764-201ENSMUST00000158370 92 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm27552-201ENSMUST00000183351 62 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm27844-201ENSMUST00000183613 62 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm18352-201ENSMUST00000189113 902 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm18038-201ENSMUST00000197900 485 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm18730-201ENSMUST00000218038 343 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gm270-201ENSMUST00000223010 976 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.61□□□□□ -0.39
Scube3Q66PY1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scube3Q66PY1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scube3Q66PY1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scube3Q66PY1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scube3Q66PY1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms