Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sycp1Q62209 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sycp1Q62209 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.29□□□□□ -0.28
Sycp1Q62209 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sycp1Q62209 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sycp1Q62209 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.28□□□□□ -0.28
Sycp1Q62209 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.28□□□□□ -0.28
Sycp1Q62209 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.28□□□□□ -0.28
Sycp1Q62209 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm9257-201ENSMUST00000221254 232 ntBASIC13.28□□□□□ -0.28
Sycp1Q62209 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sycp1Q62209 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.28□□□□□ -0.28
Sycp1Q62209 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.27□□□□□ -0.28
Sycp1Q62209 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sycp1Q62209 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.27□□□□□ -0.28
Sycp1Q62209 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.27□□□□□ -0.28
Sycp1Q62209 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sycp1Q62209 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm14130-201ENSMUST00000118417 987 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm27390-201ENSMUST00000184516 176 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sycp1Q62209 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sycp1Q62209 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms