Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Mir744-201ENSMUST00000103261 100 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm11475-201ENSMUST00000118482 476 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm17221-201ENSMUST00000163909 481 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm17073-201ENSMUST00000168069 556 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm8756-201ENSMUST00000183250 929 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm44814-201ENSMUST00000207018 434 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn9aQ62205 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.66□□□□□ -0.22
Scn9aQ62205 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn9aQ62205 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm15329-201ENSMUST00000121408 155 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn9aQ62205 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm9102-201ENSMUST00000219250 465 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm23745-201ENSMUST00000104230 125 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Scn9aQ62205 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn9aQ62205 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.65□□□□□ -0.22
Scn9aQ62205 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn9aQ62205 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scn9aQ62205 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms