Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.76□□□□□ -0.69
VcanQ62059 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.76□□□□□ -0.69
VcanQ62059 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.76□□□□□ -0.69
VcanQ62059 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Gm8618-201ENSMUST00000097570 432 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VcanQ62059 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
VcanQ62059 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.76□□□□□ -0.69
VcanQ62059 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm15636-201ENSMUST00000119205 668 ntBASIC10.76□□□□□ -0.69
VcanQ62059 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.76□□□□□ -0.69
VcanQ62059 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VcanQ62059 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VcanQ62059 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC10.75□□□□□ -0.69
VcanQ62059 Gm18555-201ENSMUST00000197935 584 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Gm6441-201ENSMUST00000120983 696 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Gm8601-201ENSMUST00000182096 909 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Gm5254-201ENSMUST00000188353 977 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Gm6478-201ENSMUST00000099450 742 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.75□□□□□ -0.69
VcanQ62059 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.75□□□□□ -0.69
VcanQ62059 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VcanQ62059 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Gm4294-201ENSMUST00000105169 614 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VcanQ62059 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC10.74□□□□□ -0.69
VcanQ62059 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
VcanQ62059 Gm3945-201ENSMUST00000196637 683 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Gm44540-201ENSMUST00000205640 354 ntBASIC10.74□□□□□ -0.69
VcanQ62059 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.74□□□□□ -0.69
VcanQ62059 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.74□□□□□ -0.69
VcanQ62059 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VcanQ62059 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
VcanQ62059 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms