Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ClpbQ60649 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.38□□□□□ -0.59
ClpbQ60649 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.37□□□□□ -0.59
ClpbQ60649 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
ClpbQ60649 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.37□□□□□ -0.59
ClpbQ60649 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.37□□□□□ -0.59
ClpbQ60649 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Mir7070-201ENSMUST00000183657 86 ntBASIC11.37□□□□□ -0.59
ClpbQ60649 Gm28450-201ENSMUST00000187349 638 ntBASIC11.37□□□□□ -0.59
ClpbQ60649 AY036118-201ENSMUST00000200021 923 ntBASIC11.37□□□□□ -0.59
ClpbQ60649 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ClpbQ60649 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
ClpbQ60649 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.37□□□□□ -0.59
ClpbQ60649 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
ClpbQ60649 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ClpbQ60649 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ClpbQ60649 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ClpbQ60649 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm7857-201ENSMUST00000117957 358 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Mir6927-201ENSMUST00000184494 71 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Gm43138-201ENSMUST00000199123 708 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Gm43962-201ENSMUST00000203898 190 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.36□□□□□ -0.59
ClpbQ60649 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
ClpbQ60649 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.36□□□□□ -0.59
ClpbQ60649 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ClpbQ60649 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms