Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shroom1Q5SX79 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shroom1Q5SX79 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shroom1Q5SX79 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shroom1Q5SX79 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm22144-201ENSMUST00000157402 102 ntBASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shroom1Q5SX79 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm13888-201ENSMUST00000119148 422 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm15782-201ENSMUST00000121073 445 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm9540-201ENSMUST00000188230 478 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm5714-201ENSMUST00000197343 566 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm9132-201ENSMUST00000210182 832 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shroom1Q5SX79 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms