Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm15036-201ENSMUST00000118880 400 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm26134-201ENSMUST00000178484 110 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm5706-201ENSMUST00000181525 993 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm37826-201ENSMUST00000195329 322 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm17931-201ENSMUST00000208132 634 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm5451-201ENSMUST00000080545 579 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm23105-201ENSMUST00000083719 134 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm43452-201ENSMUST00000201873 991 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm3726-201ENSMUST00000203110 785 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.1□□□□□ -0.31
Ccdc85aQ5SP85 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc85aQ5SP85 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms