Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx49Q4FZF3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm18059-201ENSMUST00000208073 580 ntBASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx49Q4FZF3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm3150-201ENSMUST00000166418 204 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Mir6407-201ENSMUST00000184510 101 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm5621-201ENSMUST00000187303 640 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm43852-201ENSMUST00000202098 917 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Gm23680-201ENSMUST00000083162 164 ntBASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ddx49Q4FZF3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms