Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm14659-201ENSMUST00000117667 843 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm11439-201ENSMUST00000118598 409 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm18584-201ENSMUST00000203098 964 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm18054-201ENSMUST00000207539 555 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm9823-201ENSMUST00000051212 327 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm26232-201ENSMUST00000083360 166 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Shisa3Q3UPR0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Shisa3Q3UPR0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Mir1938-201ENSMUST00000158746 100 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm3890-201ENSMUST00000182416 207 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm6007-201ENSMUST00000208170 823 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm18377-201ENSMUST00000215141 607 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Shisa3Q3UPR0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shisa3Q3UPR0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms