Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm14219-201ENSMUST00000120414 288 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm6407-201ENSMUST00000176468 549 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm9116-201ENSMUST00000192400 1018 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm39288-201ENSMUST00000210554 446 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm45758-201ENSMUST00000212448 1006 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm19046-201ENSMUST00000221263 1298 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm5468-202ENSMUST00000227851 682 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Puf60Q3UEB3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm10169-201ENSMUST00000121822 348 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm42816-201ENSMUST00000198433 325 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 AC124457.1-201ENSMUST00000198845 120 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 CT030170.2-201ENSMUST00000223267 126 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Puf60Q3UEB3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm14071-201ENSMUST00000117817 509 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm25554-201ENSMUST00000158075 113 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm6548-201ENSMUST00000167498 1165 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm45592-201ENSMUST00000209605 1043 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm4811-201ENSMUST00000220879 1220 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Gm16380-201ENSMUST00000077997 478 ntBASIC16.12■□□□□ 0.17
Puf60Q3UEB3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Puf60Q3UEB3 n-R5s185-201ENSMUST00000083953 119 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms