Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm27320-201ENSMUST00000184892 109 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 AA914427-201ENSMUST00000193194 1166 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Gm38317-201ENSMUST00000195564 343 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Gm45331-201ENSMUST00000209868 554 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Brf2Q3UAW9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Gm7783-201ENSMUST00000204795 781 ntBASIC11.12□□□□□ -0.63
Brf2Q3UAW9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Brf2Q3UAW9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms