Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Gm22042-201ENSMUST00000082989 165 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 Gm26110-201ENSMUST00000083971 165 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.04□□□□□ -0.48
Thumpd3P97770 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Thumpd3P97770 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.04□□□□□ -0.48
Thumpd3P97770 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Thumpd3P97770 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thumpd3P97770 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thumpd3P97770 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm13736-201ENSMUST00000119272 253 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm13875-201ENSMUST00000120162 282 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm12997-201ENSMUST00000120207 640 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.03□□□□□ -0.48
Thumpd3P97770 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Mir3102-201ENSMUST00000175555 104 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm5363-201ENSMUST00000211927 938 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thumpd3P97770 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Thumpd3P97770 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd3P97770 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd3P97770 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd3P97770 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Thumpd3P97770 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thumpd3P97770 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.02□□□□□ -0.48
Thumpd3P97770 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.02□□□□□ -0.48
Thumpd3P97770 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.02□□□□□ -0.48
Thumpd3P97770 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms