Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm17931-201ENSMUST00000208132 634 ntBASIC10.95□□□□□ -0.66
Cacna1aP97445 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.95□□□□□ -0.66
Cacna1aP97445 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cacna1aP97445 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cacna1aP97445 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Cacna1aP97445 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm38151-201ENSMUST00000195085 289 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm7238-201ENSMUST00000206467 973 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Gm5599-201ENSMUST00000209602 788 ntBASIC10.94□□□□□ -0.66
Cacna1aP97445 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cacna1aP97445 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cacna1aP97445 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm7150-201ENSMUST00000122032 981 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm17070-201ENSMUST00000170463 784 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Gm6108-201ENSMUST00000208365 367 ntBASIC10.93□□□□□ -0.66
Cacna1aP97445 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cacna1aP97445 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms