Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Gm14058-201ENSMUST00000116082 735 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm15515-201ENSMUST00000117827 822 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm11340-201ENSMUST00000119226 412 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm14999-201ENSMUST00000121039 624 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.99□□□□□ -0.33
Lig3P97386 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.99□□□□□ -0.33
Lig3P97386 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Lig3P97386 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.99□□□□□ -0.33
Lig3P97386 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.99□□□□□ -0.33
Lig3P97386 Gm28071-201ENSMUST00000190355 478 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm38210-201ENSMUST00000191944 809 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.99□□□□□ -0.33
Lig3P97386 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Lig3P97386 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lig3P97386 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lig3P97386 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lig3P97386 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Gm13035-201ENSMUST00000117496 342 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Gm8018-201ENSMUST00000173536 789 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Gm25951-201ENSMUST00000175330 64 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Gm45550-201ENSMUST00000209380 946 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.98□□□□□ -0.33
Lig3P97386 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Lig3P97386 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lig3P97386 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lig3P97386 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lig3P97386 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.97□□□□□ -0.33
Lig3P97386 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lig3P97386 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.97□□□□□ -0.33
Lig3P97386 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Lig3P97386 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lig3P97386 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lig3P97386 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lig3P97386 Gm13047-201ENSMUST00000117116 815 ntBASIC12.97□□□□□ -0.33
Lig3P97386 Gm11941-201ENSMUST00000119904 610 ntBASIC12.97□□□□□ -0.33
Lig3P97386 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms