Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.8□□□□□ -0.84
Lsm5P62322 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lsm5P62322 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.8□□□□□ -0.84
Lsm5P62322 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Lsm5P62322 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.8□□□□□ -0.84
Lsm5P62322 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm44855-201ENSMUST00000205725 362 ntBASIC9.8□□□□□ -0.84
Lsm5P62322 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.8□□□□□ -0.84
Lsm5P62322 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.8□□□□□ -0.84
Lsm5P62322 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Lsm5P62322 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.8□□□□□ -0.84
Lsm5P62322 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Lsm5P62322 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Lsm5P62322 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Erich3-203ENSMUST00000189969 3460 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm5P62322 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.79□□□□□ -0.84
Lsm5P62322 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Lsm5P62322 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Lsm5P62322 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Mir6956-201ENSMUST00000183598 62 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm8463-201ENSMUST00000208573 613 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm5P62322 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm5781-201ENSMUST00000219792 443 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm5P62322 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.79□□□□□ -0.84
Lsm5P62322 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Lsm5P62322 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.79□□□□□ -0.84
Lsm5P62322 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Lsm5P62322 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.79□□□□□ -0.84
Lsm5P62322 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms