Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm13296-201ENSMUST00000117854 997 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm11511-201ENSMUST00000118146 540 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm43962-201ENSMUST00000203898 190 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm45224-201ENSMUST00000208203 414 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.07□□□□□ -0.48
Tubgcp3P58854 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tubgcp3P58854 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm25700-201ENSMUST00000177693 110 ntBASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm8956-201ENSMUST00000203939 825 ntBASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm44967-201ENSMUST00000207047 631 ntBASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.06□□□□□ -0.48
Tubgcp3P58854 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubgcp3P58854 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.05□□□□□ -0.48
Tubgcp3P58854 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubgcp3P58854 Gm7584-201ENSMUST00000175829 940 ntBASIC12.05□□□□□ -0.48
Tubgcp3P58854 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubgcp3P58854 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms