Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Tpm1P58771 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.17□□□□□ -0.3
Tpm1P58771 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.17□□□□□ -0.3
Tpm1P58771 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tpm1P58771 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Tpm1P58771 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tpm1P58771 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Tpm1P58771 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.16□□□□□ -0.3
Tpm1P58771 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm5706-201ENSMUST00000181525 993 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm8420-201ENSMUST00000097103 598 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tpm1P58771 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.16□□□□□ -0.3
Tpm1P58771 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Tpm1P58771 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tpm1P58771 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Gm4984-201ENSMUST00000115987 360 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Gm11439-201ENSMUST00000118598 409 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.15□□□□□ -0.3
Tpm1P58771 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Gm13570-201ENSMUST00000140763 309 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.15□□□□□ -0.3
Tpm1P58771 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Tpm1P58771 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.15□□□□□ -0.3
Tpm1P58771 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.15□□□□□ -0.3
Tpm1P58771 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Tpm1P58771 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tpm1P58771 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Tpm1P58771 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tpm1P58771 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tpm1P58771 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.14□□□□□ -0.31
Tpm1P58771 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Tpm1P58771 Gm26660-202ENSMUST00000223620 4112 ntBASIC13.14□□□□□ -0.31
Tpm1P58771 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms