Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.53□□□□□ -0.88
Sssca1P56873 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Sssca1P56873 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.53□□□□□ -0.88
Sssca1P56873 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.53□□□□□ -0.88
Sssca1P56873 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.53□□□□□ -0.88
Sssca1P56873 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.53□□□□□ -0.88
Sssca1P56873 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Gm9996-201ENSMUST00000070359 913 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 Snora73a-201ENSMUST00000082453 205 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.53□□□□□ -0.88
Sssca1P56873 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Sssca1P56873 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.52□□□□□ -0.88
Sssca1P56873 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sssca1P56873 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.52□□□□□ -0.88
Sssca1P56873 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Sssca1P56873 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm10434-201ENSMUST00000101158 471 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm12390-201ENSMUST00000117897 397 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Gm11700-201ENSMUST00000119409 403 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.52□□□□□ -0.89
Sssca1P56873 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Sssca1P56873 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.52□□□□□ -0.89
Sssca1P56873 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Sssca1P56873 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sssca1P56873 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.52□□□□□ -0.89
Sssca1P56873 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Sssca1P56873 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms