Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CtskP55097 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CtskP55097 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CtskP55097 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.7□□□□□ -0.54
CtskP55097 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CtskP55097 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.7□□□□□ -0.54
CtskP55097 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
CtskP55097 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CtskP55097 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CtskP55097 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.69□□□□□ -0.54
CtskP55097 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.69□□□□□ -0.54
CtskP55097 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.69□□□□□ -0.54
CtskP55097 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CtskP55097 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CtskP55097 Gm13333-201ENSMUST00000119424 781 ntBASIC11.69□□□□□ -0.54
CtskP55097 Gm14913-201ENSMUST00000120011 1093 ntBASIC11.69□□□□□ -0.54
CtskP55097 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.69□□□□□ -0.54
CtskP55097 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm10051-201ENSMUST00000145209 414 ntBASIC11.69□□□□□ -0.54
CtskP55097 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm5733-201ENSMUST00000190232 939 ntBASIC11.69□□□□□ -0.54
CtskP55097 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.69□□□□□ -0.54
CtskP55097 Gm44126-201ENSMUST00000204831 514 ntBASIC11.69□□□□□ -0.54
CtskP55097 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.69□□□□□ -0.54
CtskP55097 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.69□□□□□ -0.54
CtskP55097 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.69□□□□□ -0.54
CtskP55097 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CtskP55097 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.69□□□□□ -0.54
CtskP55097 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.69□□□□□ -0.54
CtskP55097 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.69□□□□□ -0.54
CtskP55097 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CtskP55097 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.69□□□□□ -0.54
CtskP55097 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
CtskP55097 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CtskP55097 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CtskP55097 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CtskP55097 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.68□□□□□ -0.54
CtskP55097 Gm14201-201ENSMUST00000117627 289 ntBASIC11.68□□□□□ -0.54
CtskP55097 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.68□□□□□ -0.54
CtskP55097 Gm14126-201ENSMUST00000122345 395 ntBASIC11.68□□□□□ -0.54
CtskP55097 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.68□□□□□ -0.54
CtskP55097 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.68□□□□□ -0.54
CtskP55097 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CtskP55097 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.68□□□□□ -0.54
CtskP55097 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.68□□□□□ -0.54
CtskP55097 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CtskP55097 Gm8343-201ENSMUST00000182705 994 ntBASIC11.68□□□□□ -0.54
CtskP55097 Gm3332-201ENSMUST00000189337 928 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms