Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx6P54823 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx6P54823 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.02□□□□□ -0.48
Ddx6P54823 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ddx6P54823 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Gm26013-201ENSMUST00000104404 119 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 Gm11244-201ENSMUST00000121243 237 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.02□□□□□ -0.49
Ddx6P54823 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ddx6P54823 Mir6998-201ENSMUST00000183343 64 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 Gm28324-201ENSMUST00000187913 264 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 Gm44315-201ENSMUST00000203041 219 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.02□□□□□ -0.49
Ddx6P54823 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.02□□□□□ -0.49
Ddx6P54823 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.02□□□□□ -0.49
Ddx6P54823 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ddx6P54823 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ddx6P54823 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ddx6P54823 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Ddx6P54823 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm11628-201ENSMUST00000117568 171 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Gm16166-201ENSMUST00000118291 787 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.01□□□□□ -0.49
Ddx6P54823 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm25072-201ENSMUST00000175233 235 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm38210-201ENSMUST00000191944 809 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Gm44329-201ENSMUST00000197469 112 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.01□□□□□ -0.49
Ddx6P54823 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.01□□□□□ -0.49
Ddx6P54823 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ddx6P54823 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.01□□□□□ -0.49
Ddx6P54823 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ddx6P54823 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx6P54823 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ddx6P54823 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ddx6P54823 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx6P54823 Gm12856-201ENSMUST00000119471 1293 ntBASIC12□□□□□ -0.49
Ddx6P54823 Gm12899-201ENSMUST00000120565 551 ntBASIC12□□□□□ -0.49
Ddx6P54823 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Ddx6P54823 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Gm7741-201ENSMUST00000181445 989 ntBASIC12□□□□□ -0.49
Ddx6P54823 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12□□□□□ -0.49
Ddx6P54823 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12□□□□□ -0.49
Ddx6P54823 CT025553.1-201ENSMUST00000226292 299 ntBASIC12□□□□□ -0.49
Ddx6P54823 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx6P54823 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx6P54823 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12□□□□□ -0.49
Ddx6P54823 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms