Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm11989-201ENSMUST00000117240 672 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm11362-201ENSMUST00000118838 850 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm44364-201ENSMUST00000198368 141 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Gzmn-202ENSMUST00000225535 989 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
Fdft1P53798 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.83□□□□□ -0.52
Fdft1P53798 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fdft1P53798 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm14109-201ENSMUST00000118814 309 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Gm15610-201ENSMUST00000120584 195 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm6963-201ENSMUST00000147879 379 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm38341-201ENSMUST00000195357 515 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm43822-201ENSMUST00000200285 476 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.82□□□□□ -0.52
Fdft1P53798 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.82□□□□□ -0.52
Fdft1P53798 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.82□□□□□ -0.52
Fdft1P53798 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Fdft1P53798 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fdft1P53798 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Fdft1P53798 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.81□□□□□ -0.52
Fdft1P53798 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm12164-201ENSMUST00000121695 551 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm5706-201ENSMUST00000181525 993 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm17931-201ENSMUST00000208132 634 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.81□□□□□ -0.52
Fdft1P53798 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms