Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Gm12501-201ENSMUST00000119163 529 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox3P53784 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox3P53784 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sox3P53784 Gm18038-201ENSMUST00000197900 485 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Gm4482-201ENSMUST00000200876 742 ntBASIC11.37□□□□□ -0.59
Sox3P53784 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Sox3P53784 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.37□□□□□ -0.59
Sox3P53784 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox3P53784 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox3P53784 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Sox3P53784 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.36□□□□□ -0.59
Sox3P53784 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox3P53784 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox3P53784 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox3P53784 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.36□□□□□ -0.59
Sox3P53784 Gm3793-201ENSMUST00000204973 672 ntBASIC11.36□□□□□ -0.59
Sox3P53784 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox3P53784 Gm9132-201ENSMUST00000210182 832 ntBASIC11.36□□□□□ -0.59
Sox3P53784 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.36□□□□□ -0.59
Sox3P53784 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox3P53784 Gm8325-201ENSMUST00000099086 453 ntBASIC11.36□□□□□ -0.59
Sox3P53784 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.36□□□□□ -0.59
Sox3P53784 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sox3P53784 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox3P53784 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sox3P53784 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox3P53784 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms