Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Gm12857-201ENSMUST00000117678 592 ntBASIC11.68□□□□□ -0.54
Pdx1P52946 Gm15515-201ENSMUST00000117827 822 ntBASIC11.68□□□□□ -0.54
Pdx1P52946 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.68□□□□□ -0.54
Pdx1P52946 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.68□□□□□ -0.54
Pdx1P52946 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pdx1P52946 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.68□□□□□ -0.54
Pdx1P52946 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.68□□□□□ -0.54
Pdx1P52946 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.68□□□□□ -0.54
Pdx1P52946 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.68□□□□□ -0.54
Pdx1P52946 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.67□□□□□ -0.54
Pdx1P52946 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pdx1P52946 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Pdx1P52946 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.67□□□□□ -0.54
Pdx1P52946 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm25881-201ENSMUST00000157783 103 ntBASIC11.67□□□□□ -0.54
Pdx1P52946 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Pdx1P52946 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Gm38117-201ENSMUST00000194653 939 ntBASIC11.67□□□□□ -0.54
Pdx1P52946 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.67□□□□□ -0.54
Pdx1P52946 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Pdx1P52946 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pdx1P52946 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pdx1P52946 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.67□□□□□ -0.54
Pdx1P52946 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdx1P52946 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdx1P52946 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdx1P52946 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pdx1P52946 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms