Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.78□□□□□ -0.84
Nkx2-1P50220 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nkx2-1P50220 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.77□□□□□ -0.84
Nkx2-1P50220 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.77□□□□□ -0.84
Nkx2-1P50220 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nkx2-1P50220 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm42693-201ENSMUST00000196779 631 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm43002-201ENSMUST00000200310 155 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm10268-201ENSMUST00000085340 555 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.77□□□□□ -0.85
Nkx2-1P50220 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nkx2-1P50220 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.76□□□□□ -0.85
Nkx2-1P50220 Gm12390-201ENSMUST00000117897 397 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.76□□□□□ -0.85
Nkx2-1P50220 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms