Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm4607-201ENSMUST00000206649 577 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm45118-201ENSMUST00000208928 825 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Ntng1-201ENSMUST00000051253 327 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfx2P48379 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfx2P48379 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Gm12165-201ENSMUST00000117047 342 ntBASIC12.41□□□□□ -0.42
Rfx2P48379 Gm12857-201ENSMUST00000117678 592 ntBASIC12.41□□□□□ -0.42
Rfx2P48379 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.41□□□□□ -0.42
Rfx2P48379 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.41□□□□□ -0.42
Rfx2P48379 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfx2P48379 Gm2965-201ENSMUST00000198365 343 ntBASIC12.41□□□□□ -0.42
Rfx2P48379 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfx2P48379 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.41□□□□□ -0.42
Rfx2P48379 Gm1821-202ENSMUST00000227415 750 ntBASIC12.41□□□□□ -0.42
Rfx2P48379 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfx2P48379 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfx2P48379 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Rfx2P48379 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rfx2P48379 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rfx2P48379 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.4□□□□□ -0.42
Rfx2P48379 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 Gm13045-201ENSMUST00000119019 712 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.4□□□□□ -0.42
Rfx2P48379 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm19353-201ENSMUST00000184561 445 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.4□□□□□ -0.42
Rfx2P48379 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfx2P48379 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.4□□□□□ -0.42
Rfx2P48379 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfx2P48379 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfx2P48379 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx2P48379 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx2P48379 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx2P48379 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rfx2P48379 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.39□□□□□ -0.43
Rfx2P48379 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfx2P48379 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms