Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Gm15703-201ENSMUST00000120250 880 ntBASIC11.57□□□□□ -0.56
Sox18P43680 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.57□□□□□ -0.56
Sox18P43680 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox18P43680 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Sox18P43680 Gm8641-201ENSMUST00000186995 826 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox18P43680 Gm5100-201ENSMUST00000195631 589 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Gm44158-201ENSMUST00000203881 505 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.57□□□□□ -0.56
Sox18P43680 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox18P43680 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox18P43680 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.57□□□□□ -0.56
Sox18P43680 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Sox18P43680 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Sox18P43680 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Sox18P43680 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.56□□□□□ -0.56
Sox18P43680 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox18P43680 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox18P43680 Gm21092-201ENSMUST00000178995 955 ntBASIC11.56□□□□□ -0.56
Sox18P43680 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm18304-201ENSMUST00000189162 546 ntBASIC11.56□□□□□ -0.56
Sox18P43680 Gm37234-201ENSMUST00000193259 1441 ntBASIC11.56□□□□□ -0.56
Sox18P43680 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.56□□□□□ -0.56
Sox18P43680 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.56□□□□□ -0.56
Sox18P43680 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox18P43680 AC121986.1-201ENSMUST00000218588 781 ntBASIC11.56□□□□□ -0.56
Sox18P43680 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox18P43680 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox18P43680 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox18P43680 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms