Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.7□□□□□ -0.86
VhlP40338 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.7□□□□□ -0.86
VhlP40338 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.7□□□□□ -0.86
VhlP40338 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
VhlP40338 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.7□□□□□ -0.86
VhlP40338 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.7□□□□□ -0.86
VhlP40338 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Gm9996-201ENSMUST00000070359 913 ntBASIC9.7□□□□□ -0.86
VhlP40338 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.7□□□□□ -0.86
VhlP40338 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.7□□□□□ -0.86
VhlP40338 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
VhlP40338 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.7□□□□□ -0.86
VhlP40338 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
VhlP40338 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.7□□□□□ -0.86
VhlP40338 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
VhlP40338 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.69□□□□□ -0.86
VhlP40338 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Gm13829-201ENSMUST00000119600 138 ntBASIC9.69□□□□□ -0.86
VhlP40338 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.69□□□□□ -0.86
VhlP40338 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.69□□□□□ -0.86
VhlP40338 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.69□□□□□ -0.86
VhlP40338 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.69□□□□□ -0.86
VhlP40338 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.69□□□□□ -0.86
VhlP40338 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
VhlP40338 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.69□□□□□ -0.86
VhlP40338 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.69□□□□□ -0.86
VhlP40338 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
VhlP40338 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
VhlP40338 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
VhlP40338 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
VhlP40338 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.68□□□□□ -0.86
VhlP40338 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
VhlP40338 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms