Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm12337-201ENSMUST00000119634 400 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm34379-201ENSMUST00000195036 290 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm43854-201ENSMUST00000200418 394 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm5599-201ENSMUST00000209602 788 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm9791-201ENSMUST00000060997 447 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.14□□□□□ -0.47
Cxcl12P40224 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cxcl12P40224 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cxcl12P40224 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm9630-201ENSMUST00000178304 885 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm9162-201ENSMUST00000182081 991 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm37782-201ENSMUST00000194879 678 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.13□□□□□ -0.47
Cxcl12P40224 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Gm8181-201ENSMUST00000062242 669 ntBASIC12.13□□□□□ -0.47
Cxcl12P40224 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.13□□□□□ -0.47
Cxcl12P40224 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cxcl12P40224 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm16459-201ENSMUST00000121443 686 ntBASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm8197-202ENSMUST00000193422 934 ntBASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm43547-201ENSMUST00000197729 328 ntBASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gm2594-201ENSMUST00000214774 742 ntBASIC12.12□□□□□ -0.47
Cxcl12P40224 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms