Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Upk2P38575 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Upk2P38575 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Upk2P38575 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.35□□□□□ -0.75
Upk2P38575 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.35□□□□□ -0.75
Upk2P38575 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.35□□□□□ -0.75
Upk2P38575 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.35□□□□□ -0.75
Upk2P38575 Gm37666-201ENSMUST00000194110 866 ntBASIC10.35□□□□□ -0.75
Upk2P38575 Gm43002-201ENSMUST00000200310 155 ntBASIC10.35□□□□□ -0.75
Upk2P38575 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.35□□□□□ -0.75
Upk2P38575 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Upk2P38575 Gm9797-202ENSMUST00000218003 294 ntBASIC10.35□□□□□ -0.75
Upk2P38575 Gm270-201ENSMUST00000223010 976 ntBASIC10.35□□□□□ -0.75
Upk2P38575 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk2P38575 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk2P38575 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Upk2P38575 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Upk2P38575 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.34□□□□□ -0.75
Upk2P38575 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm11509-201ENSMUST00000117358 325 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Mir7677-201ENSMUST00000184226 67 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Gm28071-201ENSMUST00000190355 478 ntBASIC10.34□□□□□ -0.75
Upk2P38575 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Gm18038-201ENSMUST00000197900 485 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm44262-201ENSMUST00000204969 372 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm26448-201ENSMUST00000082446 203 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Upk2P38575 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.34□□□□□ -0.75
Upk2P38575 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Upk2P38575 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms