Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfc1P35601 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Gm11424-201ENSMUST00000121929 829 ntBASIC12.45□□□□□ -0.42
Rfc1P35601 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.45□□□□□ -0.42
Rfc1P35601 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.45□□□□□ -0.42
Rfc1P35601 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Rfc1P35601 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.45□□□□□ -0.42
Rfc1P35601 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Rfc1P35601 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rfc1P35601 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfc1P35601 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Rfc1P35601 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfc1P35601 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfc1P35601 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.44□□□□□ -0.42
Rfc1P35601 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.44□□□□□ -0.42
Rfc1P35601 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfc1P35601 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Rfc1P35601 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Gm26927-201ENSMUST00000182385 965 ntBASIC12.44□□□□□ -0.42
Rfc1P35601 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rfc1P35601 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.44□□□□□ -0.42
Rfc1P35601 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rfc1P35601 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.44□□□□□ -0.42
Rfc1P35601 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfc1P35601 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfc1P35601 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.43□□□□□ -0.42
Rfc1P35601 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 Gm16177-201ENSMUST00000120728 718 ntBASIC12.43□□□□□ -0.42
Rfc1P35601 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfc1P35601 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfc1P35601 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms