Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.92□□□□□ -0.66
Sftpa1P35242 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm8459-201ENSMUST00000162504 760 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm6108-201ENSMUST00000208365 367 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Gm18968-201ENSMUST00000221319 862 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.92□□□□□ -0.66
Sftpa1P35242 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sftpa1P35242 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sftpa1P35242 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm10169-201ENSMUST00000121822 348 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm9089-201ENSMUST00000122027 526 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm5700-201ENSMUST00000191483 989 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm9136-201ENSMUST00000193368 454 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sftpa1P35242 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.91□□□□□ -0.66
Sftpa1P35242 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.91□□□□□ -0.66
Sftpa1P35242 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sftpa1P35242 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms