Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.25□□□□□ -0.29
Col2a1P28481 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Gm12990-201ENSMUST00000120372 468 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.24□□□□□ -0.29
Col2a1P28481 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.24□□□□□ -0.29
Col2a1P28481 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.24□□□□□ -0.29
Col2a1P28481 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm19246-201ENSMUST00000173599 255 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.24□□□□□ -0.29
Col2a1P28481 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm5805-201ENSMUST00000072779 456 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.24□□□□□ -0.29
Col2a1P28481 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.24□□□□□ -0.29
Col2a1P28481 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Col2a1P28481 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col2a1P28481 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Col2a1P28481 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm23218-201ENSMUST00000158124 276 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm25517-201ENSMUST00000083865 134 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col2a1P28481 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Col2a1P28481 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col2a1P28481 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.23□□□□□ -0.29
Col2a1P28481 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm14807-201ENSMUST00000116640 983 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm17192-201ENSMUST00000169031 511 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.23□□□□□ -0.29
Col2a1P28481 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.23□□□□□ -0.29
Col2a1P28481 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col2a1P28481 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col2a1P28481 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col2a1P28481 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms