Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.29□□□□□ -0.44
H2afxP27661 Gm19220-201ENSMUST00000222682 803 ntBASIC12.29□□□□□ -0.44
H2afxP27661 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2afxP27661 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.29□□□□□ -0.44
H2afxP27661 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afxP27661 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afxP27661 Gm15610-201ENSMUST00000120584 195 ntBASIC12.28□□□□□ -0.44
H2afxP27661 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.28□□□□□ -0.44
H2afxP27661 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.28□□□□□ -0.44
H2afxP27661 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afxP27661 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afxP27661 Gm10076-201ENSMUST00000073238 384 ntBASIC12.28□□□□□ -0.44
H2afxP27661 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afxP27661 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afxP27661 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.27□□□□□ -0.44
H2afxP27661 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.27□□□□□ -0.44
H2afxP27661 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afxP27661 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Gm24934-201ENSMUST00000103764 111 ntBASIC12.27□□□□□ -0.45
H2afxP27661 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.27□□□□□ -0.45
H2afxP27661 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Rprl1-201ENSMUST00000158050 327 ntBASIC12.27□□□□□ -0.45
H2afxP27661 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Gm9192-201ENSMUST00000183221 985 ntBASIC12.27□□□□□ -0.45
H2afxP27661 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 Gm45930-201ENSMUST00000221330 292 ntBASIC12.27□□□□□ -0.45
H2afxP27661 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afxP27661 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afxP27661 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms