Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Pde6bP23440 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.97□□□□□ -0.33
Pde6bP23440 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pde6bP23440 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.96□□□□□ -0.33
Pde6bP23440 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pde6bP23440 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pde6bP23440 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.96□□□□□ -0.33
Pde6bP23440 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6bP23440 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Pde6bP23440 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.96□□□□□ -0.34
Pde6bP23440 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6bP23440 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pde6bP23440 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.96□□□□□ -0.34
Pde6bP23440 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm5419-201ENSMUST00000119301 527 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Gm14247-201ENSMUST00000120950 237 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm17831-201ENSMUST00000205579 900 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm45575-201ENSMUST00000210283 548 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.95□□□□□ -0.34
Pde6bP23440 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6bP23440 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.95□□□□□ -0.34
Pde6bP23440 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms