Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.76□□□□□ -0.37
RaraP11416 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.76□□□□□ -0.37
RaraP11416 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.76□□□□□ -0.37
RaraP11416 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.76□□□□□ -0.37
RaraP11416 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 Gm27516-201ENSMUST00000184237 98 ntBASIC12.76□□□□□ -0.37
RaraP11416 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.76□□□□□ -0.37
RaraP11416 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Lect2-202ENSMUST00000225183 823 ntBASIC12.76□□□□□ -0.37
RaraP11416 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Gm5455-201ENSMUST00000058710 715 ntBASIC12.76□□□□□ -0.37
RaraP11416 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.76□□□□□ -0.37
RaraP11416 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.76□□□□□ -0.37
RaraP11416 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.76□□□□□ -0.37
RaraP11416 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.76□□□□□ -0.37
RaraP11416 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.76□□□□□ -0.37
RaraP11416 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.76□□□□□ -0.37
RaraP11416 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RaraP11416 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RaraP11416 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.75□□□□□ -0.37
RaraP11416 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.75□□□□□ -0.37
RaraP11416 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.75□□□□□ -0.37
RaraP11416 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm12241-201ENSMUST00000118330 726 ntBASIC12.75□□□□□ -0.37
RaraP11416 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.75□□□□□ -0.37
RaraP11416 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.75□□□□□ -0.37
RaraP11416 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.75□□□□□ -0.37
RaraP11416 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.75□□□□□ -0.37
RaraP11416 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.75□□□□□ -0.37
RaraP11416 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.75□□□□□ -0.37
RaraP11416 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.75□□□□□ -0.37
RaraP11416 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.75□□□□□ -0.37
RaraP11416 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.75□□□□□ -0.37
RaraP11416 Gm19187-201ENSMUST00000206781 892 ntBASIC12.75□□□□□ -0.37
RaraP11416 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RaraP11416 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.75□□□□□ -0.37
RaraP11416 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.75□□□□□ -0.37
RaraP11416 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.75□□□□□ -0.37
RaraP11416 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gm10478-201ENSMUST00000084451 396 ntBASIC12.75□□□□□ -0.37
RaraP11416 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.75□□□□□ -0.37
RaraP11416 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RaraP11416 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RaraP11416 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.75□□□□□ -0.37
RaraP11416 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RaraP11416 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RaraP11416 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms