Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fv4P11370 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fv4P11370 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.41□□□□□ -0.58
Fv4P11370 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Fv4P11370 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.41□□□□□ -0.58
Fv4P11370 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fv4P11370 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.41□□□□□ -0.58
Fv4P11370 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Fv4P11370 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Rgr-203ENSMUST00000225070 4704 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Gm26286-201ENSMUST00000104166 134 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Gm11439-201ENSMUST00000118598 409 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.4□□□□□ -0.58
Fv4P11370 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Fv4P11370 Gm27516-201ENSMUST00000184237 98 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Lect2-202ENSMUST00000225183 823 ntBASIC11.4□□□□□ -0.58
Fv4P11370 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.4□□□□□ -0.58
Fv4P11370 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fv4P11370 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fv4P11370 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fv4P11370 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Fv4P11370 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fv4P11370 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fv4P11370 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.4□□□□□ -0.59
Fv4P11370 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fv4P11370 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fv4P11370 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fv4P11370 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.39□□□□□ -0.59
Fv4P11370 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm11660-201ENSMUST00000120955 412 ntBASIC11.39□□□□□ -0.59
Fv4P11370 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.39□□□□□ -0.59
Fv4P11370 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Fv4P11370 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.39□□□□□ -0.59
Fv4P11370 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.39□□□□□ -0.59
Fv4P11370 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.39□□□□□ -0.59
Fv4P11370 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.39□□□□□ -0.59
Fv4P11370 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.39□□□□□ -0.59
Fv4P11370 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Fv4P11370 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fv4P11370 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms