Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ccl3P10855 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ccl3P10855 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ccl3P10855 Gm13047-201ENSMUST00000117116 815 ntBASIC10.41□□□□□ -0.74
Ccl3P10855 Gm12247-201ENSMUST00000117585 670 ntBASIC10.41□□□□□ -0.74
Ccl3P10855 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.41□□□□□ -0.74
Ccl3P10855 Gm13022-201ENSMUST00000121181 285 ntBASIC10.41□□□□□ -0.74
Ccl3P10855 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.41□□□□□ -0.74
Ccl3P10855 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ccl3P10855 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.41□□□□□ -0.74
Ccl3P10855 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Ccl3P10855 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ccl3P10855 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Ccl3P10855 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Ccl3P10855 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.41□□□□□ -0.74
Ccl3P10855 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Ccl3P10855 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Ccl3P10855 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Ccl3P10855 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.4□□□□□ -0.74
Ccl3P10855 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.4□□□□□ -0.74
Ccl3P10855 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.4□□□□□ -0.74
Ccl3P10855 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.4□□□□□ -0.74
Ccl3P10855 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Ccl3P10855 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Ccl3P10855 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccl3P10855 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Ccl3P10855 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ccl3P10855 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl3P10855 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl3P10855 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.4□□□□□ -0.75
Ccl3P10855 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ccl3P10855 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl3P10855 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccl3P10855 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.39□□□□□ -0.75
Ccl3P10855 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl3P10855 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccl3P10855 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms