Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm14395-201ENSMUST00000120494 563 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm7741-201ENSMUST00000181445 989 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm18561-201ENSMUST00000206027 804 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm24248-201ENSMUST00000157321 322 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm6114-201ENSMUST00000182472 968 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm7504-201ENSMUST00000201449 424 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm10263-201ENSMUST00000085163 300 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.07□□□□□ -0.32
Hoxc6P10629 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hoxc6P10629 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hoxc6P10629 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc6P10629 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc6P10629 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.06□□□□□ -0.32
Hoxc6P10629 Gm25545-201ENSMUST00000122673 323 ntBASIC13.06□□□□□ -0.32
Hoxc6P10629 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Gm8723-201ENSMUST00000166076 820 ntBASIC13.06□□□□□ -0.32
Hoxc6P10629 Gm8701-201ENSMUST00000169259 874 ntBASIC13.06□□□□□ -0.32
Hoxc6P10629 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.06□□□□□ -0.32
Hoxc6P10629 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hoxc6P10629 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hoxc6P10629 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms