Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC11.98□□□□□ -0.49
Hoxb3P09026 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Gm43952-201ENSMUST00000203765 751 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC11.98□□□□□ -0.49
Hoxb3P09026 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 Gm270-201ENSMUST00000223010 976 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Hoxb3P09026 AC173482.2-201ENSMUST00000224044 750 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 AC133598.4-201ENSMUST00000224577 454 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Ermard-209ENSMUST00000226561 1019 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hoxb3P09026 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hoxb3P09026 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxb3P09026 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxb3P09026 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.98□□□□□ -0.49
Hoxb3P09026 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxb3P09026 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm12736-201ENSMUST00000119330 236 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm14938-201ENSMUST00000119482 943 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm4726-201ENSMUST00000135604 736 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm6019-201ENSMUST00000148369 736 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm22146-201ENSMUST00000157397 288 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm20694-201ENSMUST00000176943 404 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm37299-201ENSMUST00000193951 826 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm18123-201ENSMUST00000210874 822 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Gm21811-201ENSMUST00000096485 930 ntBASIC11.97□□□□□ -0.49
Hoxb3P09026 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxb3P09026 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxb3P09026 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.96□□□□□ -0.49
Hoxb3P09026 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hoxb3P09026 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms