Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.18□□□□□ -0.62
ApoeP08226 Gm6222-202ENSMUST00000182143 629 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Gm28882-201ENSMUST00000185504 314 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Gm38314-201ENSMUST00000195709 625 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.18□□□□□ -0.62
ApoeP08226 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.18□□□□□ -0.62
ApoeP08226 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.18□□□□□ -0.62
ApoeP08226 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
ApoeP08226 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
ApoeP08226 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
ApoeP08226 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ApoeP08226 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
ApoeP08226 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Gm27839-201ENSMUST00000184242 106 ntBASIC11.17□□□□□ -0.62
ApoeP08226 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.17□□□□□ -0.62
ApoeP08226 Lect2-202ENSMUST00000225183 823 ntBASIC11.17□□□□□ -0.62
ApoeP08226 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
ApoeP08226 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
ApoeP08226 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.17□□□□□ -0.62
ApoeP08226 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
ApoeP08226 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
ApoeP08226 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.17□□□□□ -0.62
ApoeP08226 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ApoeP08226 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
ApoeP08226 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
ApoeP08226 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Btrc-209ENSMUST00000224478 2194 ntBASIC11.16□□□□□ -0.62
ApoeP08226 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ApoeP08226 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ApoeP08226 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.16□□□□□ -0.62
ApoeP08226 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms