Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm18893-201ENSMUST00000198416 943 ntBASIC12.16□□□□□ -0.46
CopeO89079 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CopeO89079 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CopeO89079 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.16□□□□□ -0.46
CopeO89079 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CopeO89079 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CopeO89079 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CopeO89079 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.16□□□□□ -0.46
CopeO89079 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
CopeO89079 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.15□□□□□ -0.46
CopeO89079 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.15□□□□□ -0.46
CopeO89079 Gm17150-201ENSMUST00000165577 381 ntBASIC12.15□□□□□ -0.46
CopeO89079 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CopeO89079 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.15□□□□□ -0.46
CopeO89079 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Gm37008-201ENSMUST00000195712 319 ntBASIC12.15□□□□□ -0.46
CopeO89079 Gm42627-201ENSMUST00000197347 224 ntBASIC12.15□□□□□ -0.46
CopeO89079 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Gm6266-201ENSMUST00000203844 806 ntBASIC12.15□□□□□ -0.46
CopeO89079 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.15□□□□□ -0.46
CopeO89079 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CopeO89079 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CopeO89079 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CopeO89079 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
CopeO89079 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.15□□□□□ -0.47
CopeO89079 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CopeO89079 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.14□□□□□ -0.47
CopeO89079 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.14□□□□□ -0.47
CopeO89079 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CopeO89079 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CopeO89079 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.14□□□□□ -0.47
CopeO89079 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CopeO89079 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.14□□□□□ -0.47
CopeO89079 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.14□□□□□ -0.47
CopeO89079 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CopeO89079 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CopeO89079 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms