Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC14.02□□□□□ -0.17
Hdac1O09106 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 Gm9466-201ENSMUST00000218144 2246 ntBASIC14.02□□□□□ -0.17
Hdac1O09106 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 AC154314.2-201ENSMUST00000223677 3502 ntBASIC14.02□□□□□ -0.17
Hdac1O09106 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 AC211878.3-201ENSMUST00000222629 2018 ntBASIC14.02□□□□□ -0.17
Hdac1O09106 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac1O09106 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC14.01□□□□□ -0.17
Hdac1O09106 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hdac1O09106 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.01□□□□□ -0.17
Hdac1O09106 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdac1O09106 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hdac1O09106 Gm13297-201ENSMUST00000120205 934 ntBASIC14.01□□□□□ -0.17
Hdac1O09106 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.01□□□□□ -0.17
Hdac1O09106 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.01□□□□□ -0.17
Hdac1O09106 Gm44415-201ENSMUST00000204151 2112 ntBASIC14.01□□□□□ -0.17
Hdac1O09106 Gm19187-201ENSMUST00000206781 892 ntBASIC14.01□□□□□ -0.17
Hdac1O09106 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.01□□□□□ -0.17
Hdac1O09106 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.01□□□□□ -0.17
Hdac1O09106 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hdac1O09106 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac1O09106 Gm43127-201ENSMUST00000195890 2789 ntBASIC14□□□□□ -0.17
Hdac1O09106 Gm38089-201ENSMUST00000193585 1514 ntBASIC14□□□□□ -0.17
Hdac1O09106 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm5740-201ENSMUST00000211003 1857 ntBASIC14□□□□□ -0.17
Hdac1O09106 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Gm36957-201ENSMUST00000192982 2824 ntBASIC14□□□□□ -0.17
Hdac1O09106 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hdac1O09106 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14□□□□□ -0.17
Hdac1O09106 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14□□□□□ -0.17
Hdac1O09106 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hdac1O09106 Gm6963-201ENSMUST00000147879 379 ntBASIC14□□□□□ -0.17
Hdac1O09106 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Gm18065-201ENSMUST00000221395 526 ntBASIC14□□□□□ -0.17
Hdac1O09106 AC134869.4-202ENSMUST00000224350 837 ntBASIC14□□□□□ -0.17
Hdac1O09106 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Hdac1O09106 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hdac1O09106 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Hdac1O09106 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac1O09106 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.99□□□□□ -0.17
Hdac1O09106 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hdac1O09106 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.99□□□□□ -0.17
Hdac1O09106 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.99□□□□□ -0.17
Hdac1O09106 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac1O09106 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms