Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm14441-201ENSMUST00000121960 540 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm25261-201ENSMUST00000157416 134 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm29127-201ENSMUST00000188304 517 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm10254-201ENSMUST00000052888 867 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.75□□□□□ -0.69
Shisa8J3QNX5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Shisa8J3QNX5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms