Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh11xF6ZNL5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm6450-201ENSMUST00000200896 574 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh11xF6ZNL5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm24749-201ENSMUST00000157838 343 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm29615-201ENSMUST00000185371 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28224-201ENSMUST00000186078 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm29001-201ENSMUST00000186177 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28292-201ENSMUST00000186593 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28101-201ENSMUST00000187608 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm29076-201ENSMUST00000187689 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28302-201ENSMUST00000187931 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28646-201ENSMUST00000188220 697 ntBASIC13.03□□□□□ -0.32
Pcdh11xF6ZNL5 Gm28205-201ENSMUST00000189177 697 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms